BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F01SP1|AL426550
(846 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1594 1385 0.0
>3x_Contig1594
Length = 9813
Score = 1385 bits (694), Expect = 0.0
Identities = 814/846 (96%), Gaps = 17/846 (2%)
Strand = Plus / Plus
Query: 1 ttgngattccattattcaatgtgatttacctctctgtatattcgtaataagcacctttca 60
||| ||||||||||||||||||||||||||||||||| | |||||||| ||||||||||
Sbjct: 5238 ttgcgattccattattcaatgtgatttacctctctgttt--tcgtaata-gcacctttca 5294
Query: 61 ctagccaagcagctgaagcatattaccatcaagaatgamtcagaacaaacaattgccttt 120
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5295 ctagccaagcagctga-gcatattaccatcaagaatgactcagaacaaacaattgccttt 5353
Query: 121 aaggtgaaraccacagctccataaggtataactgtagtaagamctaatgccgcattatga 180
|||||||| ||||||||||| ||||||||| |||| |||||| |||||||||| ||
Sbjct: 5354 aaggtgaagaccacagctcc-taaggtata-ctgt-gtaagacctaatgccgcttt---- 5406
Query: 181 gatgccagccggtgaaagcgttgatgtatacaagtgattcttttaggattgaagagaaga 240
| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 5407 ggtgccagccggtgaaagcgttgatgtt--caagtgattcttttaggattgaag-gaaga 5463
Query: 241 acctacaccagatttcaaatgtaaagataaattcttggttatagctttgccagctcctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5464 acctacaccagatttcaaatgtaaagataaattcttggttatagctttgccagctcctta 5523
Query: 301 cgatttaggtgaactgagtgtggccgaagcttggcctcaattggaagcagagttcaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5524 cgatttaggtgaactgagtgtggccgaagcttggcctcaattggaagcagagttcaagaa 5583
Query: 361 caagggcctgtcaaagaagattaaggtaaattatcaactagatgctgaamcaagagtcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5584 caagggcctgtcaaagaagattaaggtaaattatcaactagatgctgaaccaagagtcgt 5643
Query: 421 ggaaaatctagaaactgataacgtgcaaactgagactgtcattccttcagccaaggaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5644 ggaaaatctagaaactgataacgtgcaaactgagactgtcattccttcagccaaggaaac 5703
Query: 481 tattgctagtggttcgaaagctacagaagagtccagctagtgaaccggtacaaaagadat 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 5704 tattgctagtggttcgaaagctacagaagagtcc-gctagtgaaccggtacaaaagaaat 5762
Query: 541 ctgtcccggttgcatctgccaatactgacctggatactgaaaagcgcaaaagttgtggaa 600
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5763 ctgtcccggttgcatctgccaatactgacctggatactgaaaagc-caaaagttgtggaa 5821
Query: 601 agtgaaccaaagctcgaagaaaaggtcaaatcatgataccagcgctaamactgaaattat 660
||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 5822 agtgaaccaaagctcgatgaaaaggtcaaatc-tgataccagcgctaacactgaaattat 5880
Query: 661 tgcagaacccgctagtacgtcgaatattgcrccggccgtggtcatttggatcgttatagg 720
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5881 tgcagaacccgctagtacgtcgaatattgcaccggccgtggtcatttggatcgttatagg 5940
Query: 721 tttcttactttggtattggttatcttaggatacattctgattaagtgagggaactatcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5941 tttcttactttggtattggttatcttaggatacattctgattaagtgagggaactatcaa 6000
Query: 781 mcatcgtataatatatgacaacatattwctcgactttgatagaaatgttgttatgaatta 840
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6001 ccatcgtataatatatgacaacatatttctcgactttgatagaaatgttgttatgaatta 6060
Query: 841 tattcg 846
||||||
Sbjct: 6061 tattcg 6066
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5292
Number of Sequences: 1807
Number of extensions: 5292
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 846
length of database: 10,358,551
effective HSP length: 16
effective length of query: 830
effective length of database: 10,329,639
effective search space: 8573600370
effective search space used: 8573600370
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)